This function is called within modules_across_ages() and gives the same name to modules from
ancestral networks at different ages that contain the same symbiont species or their parental species.
Arguments
- summary_networks
List of reconstructed summary networks for each age.
- unmatched_modules
A data frame outputted from
modules_from_summary_networks()containing: $name of the network node (hosts and symbionts), $age of the network, $original_module assigned to the node, and $type of the node (either "symbiont" or "host).- tree
The phylogeny of the symbiont clade (e.g. parasite, herbivore), a
phyloobject.
Value
A list of two elements: 1) a data frame containing the module information for each node at each network; 2) a data frame of correspondence between the original and the matched module names for each network.
Examples
if (FALSE) {
unmatched_modules <- modules_from_summary_networks(summary_networks)
matched_modules <- match_modules(summary_networks, unmatched_modules[[1]], tree)
}