Modified version of bipartite's computeModules function — mycomputeModules • evolnets

Modified version of bipartite's computeModules function

Usage

mycomputeModules(
  web,
  method = "Beckett",
  steps = 1e+06,
  tolerance = 1e-10,
  forceLPA = FALSE
)

Arguments

web: Incidence matrix
method: Becket
steps: steps
tolerance: tolerance
forceLPA: FALSE

Value

Modularity Q

Examples

if (FALSE) {
  data_path <- system.file("extdata", package = "evolnets")
  extant_net <- read.csv(paste0(data_path,"/interaction_matrix_pieridae.csv"), row.names = 1)

  mod <- mycomputeModules(extant_net)
}